BIOINFORMATICS
| S.No. | BASIC | ADVANCED |
|---|---|---|
| 1. | Retrieving sequence data from Entrez | Retrieve gene expression data from GEO |
| 2. | Secondary structure analysis of a protein using SOPMA | Retrieving details of a drug molecule |
| 3. | Retrieving articles using PubMed | Retrieving Gene Information from TAIR database |
| 4. | Retrieving structural data of a protein using PDB database | Protein- Ligand Interaction |
| 5. | Visualizing the Secondary Structure of a Protein | Retrieving Motif Information of a Protein Using Prosite |
| 6. | Primary Structure Analysis of a Protein Using ProtParam | Phylogenetic Analysis using PHYLIP - Unrooted trees |
| 7. | Pairwise Sequence Alignment using BLAST | Phylogenetic Analysis using PHYLIP - Rooted trees |
| 8. | Pairwise sequence alignment using FASTA | Locating the chromosome of a Gene |
| 9. | Global alignment of two sequences - Needleman-Wunsch Algorithm | Homology Modeling using Modeller |
| 10. | Genome Annotation and Multiple Sequence Alignment | Finding the Active Site Pockets of a given Protein Molecule |
| 11. | Finding ORF of a Given Sequence | Designing a primer |
| 12. | Converting chemical file formats | Construction of Cladogram |
| 13. | Aligning Multiple Sequences with CLUSTAL W | Calculating the Distance between the Ligand and a Particular Amino acid |
| 14. | Smith-Waterman Algorithm - Local Alignment of Sequences | Surface Analysis of a Protein Using CASTp |
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